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Created with Raphaël 2.2.019Jul1411753130Jun262229May3229Apr151176Jan16Oct22May14Mar13128723Jun428May26252124Apr2322Mar13Feb7628Jan15920Dec192128Nov27262426Oct1198628Sep2629Aug28code present but unused to purify strings sent to irods as metadata. this is now taken care of in parseHeaders and will be removed soonSTAG STAG-2024-…STAG STAG-2024-07-20-09-37-44 mainadd watchdog function for confirmed_put to use to not time outSTAG-2024-07-14…STAG-2024-07-14-19-36-21turn output of type() to string in log lineadd type to debugging of key value pairs for iRODS AVUSput in temp fix whild irods folks work on https://github.com/irods/python-irodsclient/issues/582STAG-2024-07-11…STAG-2024-07-11-15-04-55add debug line to show metadata_dict passed to confirmed_put()STAG-2024-07-07…STAG-2024-07-07-12-40-21put back in a default for lz_basepath to be used if env var isn't setSTAG-2024-07-05…STAG-2024-07-05-14-51-17separate case of skipping zero len file from removing (unlinking) preexisting iRODS object for replace_existing flagpull RDS_Samba path from ENV VARSenable proper handling of dcm2niix stdout and stderr when additional DICOM files come for a seriesremove a ,enable removing old confirmed_put files (objects) when skip_on_zero_len and replace_existingCan't just validate experiment id with lower case. caller must upper case it before call or else.STAG-2024-06-26…STAG-2024-06-26-08-38-21Can't just validate experiment id with lower case. caller must upper case it before call or else.add replace_existing flag and function to confirmed_put()STAG-2024-06-23…STAG-2024-06-23-13-13-11enable experiment_id_validate() to return true with lowercase letters.STAG-2024-06-17…STAG-2024-06-17-15-13-08clean up relative pathsSTAG-2024-05-04…STAG-2024-05-04-09-11-44fix up error loggingproperly reach over to neighboring module to importfix checksum checking.add ability to provide path to ssh ca certreduce log lines on object mismatch to oneSTAG-2024-04-15…STAG-2024-04-15-20-30-24enable setting the exp id via and external number at the interface or RegisterNewExperiment() for testingMerge branch 'main' of https://gitlab.tuebingen.mpg.de/hpc-kyb/mrdata-common-publicSTAG-2024-04-09…STAG-2024-04-09-13-28-17fix accept_undefined_user methodtest case for experiment ids to avoid dups and valide.add ability to accept undefined users when Registering new experiments -- mostly for test right nowSTAG-2023-10-26…STAG-2023-10-26-12-08-59fix bug in error messagePROD PROD-2023-…PROD PROD-2023-05-26-10-43-11 STAG-2023-05-26-08-44-36reduce warning and debug outputSTAG-2023-03-21…STAG-2023-03-21-21-18-42fix var name in error pathSTAG-2023-03-14…STAG-2023-03-14-11-20-06remove debug lineSTAG-2023-03-13…STAG-2023-03-13-22-21-41remove debug lineSTAG-2023-03-12…STAG-2023-03-12-14-01-50add documentation of how to recreate irods sha2 formatSTAG-2023-03-12…STAG-2023-03-12-13-17-33 STAG-main-2023-03-08-13-08-08 STAG-main-2023-03-08-13-15-16change to a streaming transfer of data to from landing zone to irods assuming no dups, but handling them if they happen. hope to avoid blowing memory cache in the uploaderreturn right away if irods_sesh is Nonechange confirmed_put() to use a timestamped temp file for initial upload rather than just blah.IMA_tmpcheck before examining old SHA512SUMB64 key because they aren't always thereupdate log linestyposet connection timeout to 6000 secs